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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs13018383 chr2:78269242 C/G HIST1H4C chr6:26104104-26104538:+ 0.48 6.68 8.44E-11 Box Plot
BLCA rs13025172 chr2:78267009 T/C HIST1H4C chr6:26104104-26104538:+ 0.46 6.47 3.03E-10 Box Plot
BLCA rs13031962 chr2:78267907 T/C HIST1H4C chr6:26104104-26104538:+ 0.45 6.41 4.4E-10 Box Plot
BLCA rs13055410 chr22:46494682 C/T RPL19P12 chr7:102781796-102782386:- -0.37 -6.29 8.6E-10 Box Plot
BLCA rs13063708 chr3:164094247 A/G LTB chr6:31548302-31550299:- 0.25 5.97 5.28E-9 Box Plot
BLCA rs13067479 chr3:134152197 A/C RPL19P12 chr7:102781796-102782386:- -0.46 -6.16 1.83E-9 Box Plot
BLCA rs13086044 chr3:164106784 C/A LTB chr6:31548302-31550299:- 0.25 5.99 4.72E-9 Box Plot
BLCA rs13111869 chr4:57112159 A/T TMEM41B chr11:9302201-9336327:- 0.37 6.19 1.56E-9 Box Plot
BLCA rs13145618 chr4:156114332 G/T BTF3 chr5:72794233-72801460:+ -0.24 -5.98 5.24E-9 Box Plot
BLCA rs13157667 chr5:176613877 C/T LOC388955 chr2:63849182-63850159:- -0.73 -13.64 8.0E-35 Box Plot
BLCA rs13167431 chr5:176621075 G/C LOC388955 chr2:63849182-63850159:- -0.73 -13.54 2.11E-34 Box Plot
BLCA rs131684 chr22:23646257 A/T POM121L10P chr22:25053448-25054732:- 0.69 13.42 6.14E-34 Box Plot
BLCA rs131686 chr22:23646953 A/T POM121L10P chr22:25053448-25054732:- 0.68 13.46 4.21E-34 Box Plot
BLCA rs131690 chr22:23648009 G/A POM121L10P chr22:25053448-25054732:- 0.69 13.45 4.6E-34 Box Plot
BLCA rs131691 chr22:23648625 T/C POM121L10P chr22:25053448-25054732:- 0.69 13.51 2.88E-34 Box Plot